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| Beretta, Valentina; Desconnets, Jean-christophe; Mougenot, Isabelle; Arslan, Muhammad; Barde, Julien; Chaffard, Véronique. |
| The recent technological advancements and emergence of the open data in environmental and life sciences are opening new research opportunities while creating new challenges around data management. They make available an unprecedented amount of data that can be exploited for studying complex phenomena. However, new challenges related to data management need to be addressed to ensure effective data sharing, discovery and reuse, especially when dealing with interdisciplinary research contexts. These issues are magnified in interdisciplinary context, by the fact that each discipline has its practices, e.g., specific formats and metadata standards. Moreover, the majority of current data management practices do not consider semantic heterogeneity existing among... |
| Tipo: Text |
Palavras-chave: Interdisciplinary datasets; Semantic metadata model; Semantics; FAIR principles. |
| Ano: 2021 |
URL: https://archimer.ifremer.fr/doc/00693/80504/83706.pdf |
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| Gueguen, Yannick; Garnier, Julien; Robert, Lorenne; Lefranc, Marie-paule; Mougenot, Isabelle; De Lorgeril, Julien; Janech, Michael; Gross, Paul S.; Warr, Gregory W.; Cuthbertson, Brandon; Barracco, Margherita A.; Bulet, Philippe; Aumelas, André; Yang, Yinshan; Bo, Dong; Xiang, Jianhai; Tassanakajon, Anchalee; Piquemal, Piquemal; Bachere, Evelyne. |
| Antimicrobial peptides play a major role in innate immunity. The penaeidins, initially characterized from the shrimp Litopenaeus vannamei, are a family of antimicrobial peptides that appear to be expressed in all penaeid shrimps. As of recent, a large number of penaeid nucleotide sequences have been identified from a variety of penaeid shrimp species and these sequences currently reside in several databases under unique identifiers with no nomenclatural continuity. To facilitate research in this field and avoid potential confusion due to a diverse number of nomenclatural designations, we have made a systematic effort to collect, analyse, and classify all the penaeidin sequences available in every database. We have identified a common penaeidin signature... |
| Tipo: Text |
Palavras-chave: Nomenclature; Sequence database; Crustacea; Antimicrobial peptide; Penaeid shrimp; Penaeidin. |
| Ano: 2006 |
URL: http://archimer.ifremer.fr/doc/2006/publication-2332.pdf |
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